Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Usp8Q80U87 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.21■□□□□ 0.99
Usp8Q80U87 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Usp8Q80U87 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Usp8Q80U87 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp8Q80U87 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp8Q80U87 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp8Q80U87 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Usp8Q80U87 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.2■□□□□ 0.98
Usp8Q80U87 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.19■□□□□ 0.98
Usp8Q80U87 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.19■□□□□ 0.98
Usp8Q80U87 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp8Q80U87 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Usp8Q80U87 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Usp8Q80U87 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Usp8Q80U87 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Usp8Q80U87 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Usp8Q80U87 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.18■□□□□ 0.98
Usp8Q80U87 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp8Q80U87 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Usp8Q80U87 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp8Q80U87 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp8Q80U87 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Usp8Q80U87 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp8Q80U87 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Usp8Q80U87 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.16■□□□□ 0.98
Usp8Q80U87 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp8Q80U87 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp8Q80U87 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Usp8Q80U87 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Usp8Q80U87 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp8Q80U87 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Usp8Q80U87 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp8Q80U87 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Usp8Q80U87 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp8Q80U87 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Usp8Q80U87 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Usp8Q80U87 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp8Q80U87 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp8Q80U87 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Usp8Q80U87 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Usp8Q80U87 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.14■□□□□ 0.98
Usp8Q80U87 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Usp8Q80U87 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp8Q80U87 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Usp8Q80U87 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Usp8Q80U87 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.13■□□□□ 0.97
Usp8Q80U87 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Usp8Q80U87 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.13■□□□□ 0.97
Usp8Q80U87 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp8Q80U87 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp8Q80U87 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp8Q80U87 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.12■□□□□ 0.97
Usp8Q80U87 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp8Q80U87 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Usp8Q80U87 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp8Q80U87 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.12■□□□□ 0.97
Usp8Q80U87 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Usp8Q80U87 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Usp8Q80U87 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Usp8Q80U87 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Usp8Q80U87 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.12■□□□□ 0.97
Usp8Q80U87 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Usp8Q80U87 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp8Q80U87 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp8Q80U87 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.11■□□□□ 0.97
Usp8Q80U87 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp8Q80U87 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp8Q80U87 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp8Q80U87 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp8Q80U87 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp8Q80U87 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp8Q80U87 Gm27502-201ENSMUST00000183495 199 ntBASIC21.1■□□□□ 0.97
Usp8Q80U87 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp8Q80U87 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp8Q80U87 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp8Q80U87 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp8Q80U87 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp8Q80U87 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp8Q80U87 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp8Q80U87 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp8Q80U87 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp8Q80U87 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp8Q80U87 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Usp8Q80U87 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp8Q80U87 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp8Q80U87 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp8Q80U87 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp8Q80U87 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp8Q80U87 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp8Q80U87 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms