Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cnih3Q6ZWS4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cnih3Q6ZWS4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cnih3Q6ZWS4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cnih3Q6ZWS4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cnih3Q6ZWS4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cnih3Q6ZWS4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.58■□□□□ 0.72
Cnih3Q6ZWS4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cnih3Q6ZWS4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cnih3Q6ZWS4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cnih3Q6ZWS4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cnih3Q6ZWS4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.57■□□□□ 0.72
Cnih3Q6ZWS4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.57■□□□□ 0.72
Cnih3Q6ZWS4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cnih3Q6ZWS4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cnih3Q6ZWS4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cnih3Q6ZWS4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cnih3Q6ZWS4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnih3Q6ZWS4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnih3Q6ZWS4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Cnih3Q6ZWS4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.55■□□□□ 0.72
Cnih3Q6ZWS4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cnih3Q6ZWS4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cnih3Q6ZWS4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnih3Q6ZWS4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnih3Q6ZWS4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cnih3Q6ZWS4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnih3Q6ZWS4 Gm9812-201ENSMUST00000061934 968 ntBASIC19.54■□□□□ 0.72
Cnih3Q6ZWS4 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cnih3Q6ZWS4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cnih3Q6ZWS4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cnih3Q6ZWS4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Cnih3Q6ZWS4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cnih3Q6ZWS4 Gm4799-201ENSMUST00000095396 657 ntBASIC19.52■□□□□ 0.72
Cnih3Q6ZWS4 Iqck-206ENSMUST00000208658 2891 ntBASIC19.52■□□□□ 0.71
Cnih3Q6ZWS4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cnih3Q6ZWS4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cnih3Q6ZWS4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cnih3Q6ZWS4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cnih3Q6ZWS4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cnih3Q6ZWS4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cnih3Q6ZWS4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cnih3Q6ZWS4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cnih3Q6ZWS4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cnih3Q6ZWS4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Cnih3Q6ZWS4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnih3Q6ZWS4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cnih3Q6ZWS4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cnih3Q6ZWS4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cnih3Q6ZWS4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnih3Q6ZWS4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnih3Q6ZWS4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cnih3Q6ZWS4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.48■□□□□ 0.71
Cnih3Q6ZWS4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.48■□□□□ 0.71
Cnih3Q6ZWS4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cnih3Q6ZWS4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cnih3Q6ZWS4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cnih3Q6ZWS4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.47■□□□□ 0.71
Cnih3Q6ZWS4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cnih3Q6ZWS4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Terc-201ENSMUST00000082862 423 ntBASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cnih3Q6ZWS4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms