Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf220Q6PDX6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Rnf220Q6PDX6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf220Q6PDX6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf220Q6PDX6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.03■□□□□ 0.8
Rnf220Q6PDX6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf220Q6PDX6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf220Q6PDX6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf220Q6PDX6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rnf220Q6PDX6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rnf220Q6PDX6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rnf220Q6PDX6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf220Q6PDX6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf220Q6PDX6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf220Q6PDX6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf220Q6PDX6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20■□□□□ 0.79
Rnf220Q6PDX6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf220Q6PDX6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf220Q6PDX6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf220Q6PDX6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.99■□□□□ 0.79
Rnf220Q6PDX6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf220Q6PDX6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Rnf220Q6PDX6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf220Q6PDX6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.97■□□□□ 0.79
Rnf220Q6PDX6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf220Q6PDX6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf220Q6PDX6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.97■□□□□ 0.79
Rnf220Q6PDX6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf220Q6PDX6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf220Q6PDX6 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rnf220Q6PDX6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf220Q6PDX6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf220Q6PDX6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf220Q6PDX6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rnf220Q6PDX6 Gm8503-201ENSMUST00000118131 455 ntBASIC19.95■□□□□ 0.78
Rnf220Q6PDX6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rnf220Q6PDX6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf220Q6PDX6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf220Q6PDX6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.94■□□□□ 0.78
Rnf220Q6PDX6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf220Q6PDX6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf220Q6PDX6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf220Q6PDX6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rnf220Q6PDX6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf220Q6PDX6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf220Q6PDX6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf220Q6PDX6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.93■□□□□ 0.78
Rnf220Q6PDX6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
Rnf220Q6PDX6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rnf220Q6PDX6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf220Q6PDX6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf220Q6PDX6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf220Q6PDX6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms