Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Srsf1Q6PDM2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Srsf1Q6PDM2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srsf1Q6PDM2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srsf1Q6PDM2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srsf1Q6PDM2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srsf1Q6PDM2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srsf1Q6PDM2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Srsf1Q6PDM2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.66■□□□□ 0.58
Srsf1Q6PDM2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srsf1Q6PDM2 Spcs1-204ENSMUST00000226782 949 ntBASIC18.66■□□□□ 0.58
Srsf1Q6PDM2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Srsf1Q6PDM2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Mir7075-201ENSMUST00000184187 82 ntBASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Gm43137-201ENSMUST00000198052 594 ntBASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Srsf1Q6PDM2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Srsf1Q6PDM2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Srsf1Q6PDM2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Srsf1Q6PDM2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Gm37179-201ENSMUST00000194862 823 ntBASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Gm42569-201ENSMUST00000200539 472 ntBASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Srsf1Q6PDM2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Srsf1Q6PDM2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srsf1Q6PDM2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Srsf1Q6PDM2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.61■□□□□ 0.57
Srsf1Q6PDM2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Srsf1Q6PDM2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srsf1Q6PDM2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srsf1Q6PDM2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srsf1Q6PDM2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Srsf1Q6PDM2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Srsf1Q6PDM2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srsf1Q6PDM2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srsf1Q6PDM2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Srsf1Q6PDM2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Srsf1Q6PDM2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srsf1Q6PDM2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srsf1Q6PDM2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.58■□□□□ 0.56
Srsf1Q6PDM2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srsf1Q6PDM2 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.58■□□□□ 0.56
Srsf1Q6PDM2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.58■□□□□ 0.56
Srsf1Q6PDM2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.58■□□□□ 0.56
Srsf1Q6PDM2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Srsf1Q6PDM2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srsf1Q6PDM2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srsf1Q6PDM2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srsf1Q6PDM2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms