Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cachd1Q6PDJ1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cachd1Q6PDJ1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cachd1Q6PDJ1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Nespas-201ENSMUST00000143738 1083 ntBASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm10602-201ENSMUST00000098239 609 ntBASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm8493-201ENSMUST00000196881 489 ntBASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm10252-201ENSMUST00000209541 832 ntBASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms