Protein–RNA interactions for Protein: Q61660

Foxj1, Forkhead box protein J1, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxj1Q61660 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxj1Q61660 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxj1Q61660 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Foxj1Q61660 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxj1Q61660 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxj1Q61660 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Foxj1Q61660 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxj1Q61660 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.72■■□□□ 1.07
Foxj1Q61660 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxj1Q61660 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxj1Q61660 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Foxj1Q61660 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxj1Q61660 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxj1Q61660 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxj1Q61660 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxj1Q61660 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.7■■□□□ 1.06
Foxj1Q61660 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxj1Q61660 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxj1Q61660 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Foxj1Q61660 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Foxj1Q61660 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Foxj1Q61660 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxj1Q61660 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
Foxj1Q61660 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.69■■□□□ 1.06
Foxj1Q61660 Gm40881-201ENSMUST00000223397 166 ntBASIC21.69■■□□□ 1.06
Foxj1Q61660 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxj1Q61660 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxj1Q61660 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Foxj1Q61660 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxj1Q61660 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Foxj1Q61660 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxj1Q61660 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxj1Q61660 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxj1Q61660 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.67■■□□□ 1.06
Foxj1Q61660 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxj1Q61660 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.67■■□□□ 1.06
Foxj1Q61660 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxj1Q61660 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxj1Q61660 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Foxj1Q61660 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxj1Q61660 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxj1Q61660 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxj1Q61660 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxj1Q61660 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxj1Q61660 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.65■■□□□ 1.06
Foxj1Q61660 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Foxj1Q61660 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Foxj1Q61660 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.64■■□□□ 1.06
Foxj1Q61660 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Foxj1Q61660 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Foxj1Q61660 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Foxj1Q61660 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Foxj1Q61660 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Foxj1Q61660 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxj1Q61660 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxj1Q61660 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Foxj1Q61660 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxj1Q61660 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.63■■□□□ 1.05
Foxj1Q61660 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Foxj1Q61660 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.63■■□□□ 1.05
Foxj1Q61660 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxj1Q61660 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxj1Q61660 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxj1Q61660 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxj1Q61660 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxj1Q61660 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxj1Q61660 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxj1Q61660 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.62■■□□□ 1.05
Foxj1Q61660 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Foxj1Q61660 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Foxj1Q61660 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.62■■□□□ 1.05
Foxj1Q61660 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.62■■□□□ 1.05
Foxj1Q61660 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.61■■□□□ 1.05
Foxj1Q61660 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Foxj1Q61660 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.61■■□□□ 1.05
Foxj1Q61660 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.61■■□□□ 1.05
Foxj1Q61660 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxj1Q61660 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.61■■□□□ 1.05
Foxj1Q61660 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Foxj1Q61660 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxj1Q61660 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Foxj1Q61660 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.6■■□□□ 1.05
Foxj1Q61660 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.6■■□□□ 1.05
Foxj1Q61660 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxj1Q61660 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxj1Q61660 Gm12922-201ENSMUST00000120626 809 ntBASIC21.6■■□□□ 1.05
Foxj1Q61660 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxj1Q61660 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.6■■□□□ 1.05
Foxj1Q61660 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.6■■□□□ 1.05
Foxj1Q61660 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxj1Q61660 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxj1Q61660 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Foxj1Q61660 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Foxj1Q61660 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.6■■□□□ 1.05
Foxj1Q61660 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Foxj1Q61660 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Foxj1Q61660 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxj1Q61660 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxj1Q61660 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Foxj1Q61660 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 121.7 ms