Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.3■□□□□ 0.52
Hcfc1Q61191 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hcfc1Q61191 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcfc1Q61191 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcfc1Q61191 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcfc1Q61191 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hcfc1Q61191 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hcfc1Q61191 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcfc1Q61191 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.28■□□□□ 0.52
Hcfc1Q61191 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcfc1Q61191 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Hcfc1Q61191 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hcfc1Q61191 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hcfc1Q61191 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcfc1Q61191 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.27■□□□□ 0.52
Hcfc1Q61191 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hcfc1Q61191 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hcfc1Q61191 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hcfc1Q61191 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.27■□□□□ 0.51
Hcfc1Q61191 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Hcfc1Q61191 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Hcfc1Q61191 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.27■□□□□ 0.51
Hcfc1Q61191 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcfc1Q61191 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.26■□□□□ 0.51
Hcfc1Q61191 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.26■□□□□ 0.51
Hcfc1Q61191 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.26■□□□□ 0.51
Hcfc1Q61191 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hcfc1Q61191 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hcfc1Q61191 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hcfc1Q61191 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.25■□□□□ 0.51
Hcfc1Q61191 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcfc1Q61191 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcfc1Q61191 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcfc1Q61191 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hcfc1Q61191 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcfc1Q61191 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hcfc1Q61191 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hcfc1Q61191 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.24■□□□□ 0.51
Hcfc1Q61191 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hcfc1Q61191 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hcfc1Q61191 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hcfc1Q61191 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hcfc1Q61191 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.24■□□□□ 0.51
Hcfc1Q61191 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Hcfc1Q61191 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcfc1Q61191 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcfc1Q61191 Gm18284-201ENSMUST00000172604 624 ntBASIC18.23■□□□□ 0.51
Hcfc1Q61191 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcfc1Q61191 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hcfc1Q61191 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.23■□□□□ 0.51
Hcfc1Q61191 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.23■□□□□ 0.51
Hcfc1Q61191 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hcfc1Q61191 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hcfc1Q61191 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcfc1Q61191 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcfc1Q61191 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hcfc1Q61191 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcfc1Q61191 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hcfc1Q61191 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Hcfc1Q61191 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hcfc1Q61191 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hcfc1Q61191 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.19■□□□□ 0.5
Hcfc1Q61191 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hcfc1Q61191 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Hcfc1Q61191 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Hcfc1Q61191 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms