Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clns1aQ61189 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clns1aQ61189 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Clns1aQ61189 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clns1aQ61189 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Clns1aQ61189 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clns1aQ61189 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clns1aQ61189 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.13■□□□□ 0.49
Clns1aQ61189 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clns1aQ61189 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clns1aQ61189 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clns1aQ61189 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.12■□□□□ 0.49
Clns1aQ61189 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.12■□□□□ 0.49
Clns1aQ61189 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.12■□□□□ 0.49
Clns1aQ61189 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clns1aQ61189 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clns1aQ61189 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Clns1aQ61189 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Clns1aQ61189 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clns1aQ61189 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clns1aQ61189 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clns1aQ61189 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clns1aQ61189 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clns1aQ61189 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clns1aQ61189 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Clns1aQ61189 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clns1aQ61189 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clns1aQ61189 Gm4799-201ENSMUST00000095396 657 ntBASIC18.1■□□□□ 0.49
Clns1aQ61189 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.1■□□□□ 0.49
Clns1aQ61189 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clns1aQ61189 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clns1aQ61189 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clns1aQ61189 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clns1aQ61189 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clns1aQ61189 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Clns1aQ61189 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clns1aQ61189 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Clns1aQ61189 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clns1aQ61189 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.09■□□□□ 0.49
Clns1aQ61189 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Clns1aQ61189 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clns1aQ61189 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clns1aQ61189 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.08■□□□□ 0.48
Clns1aQ61189 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.08■□□□□ 0.48
Clns1aQ61189 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.08■□□□□ 0.48
Clns1aQ61189 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.08■□□□□ 0.48
Clns1aQ61189 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clns1aQ61189 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Clns1aQ61189 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clns1aQ61189 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clns1aQ61189 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clns1aQ61189 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clns1aQ61189 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clns1aQ61189 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Clns1aQ61189 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clns1aQ61189 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clns1aQ61189 Gm9812-201ENSMUST00000061934 968 ntBASIC18.06■□□□□ 0.48
Clns1aQ61189 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clns1aQ61189 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clns1aQ61189 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clns1aQ61189 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clns1aQ61189 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clns1aQ61189 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clns1aQ61189 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.05■□□□□ 0.48
Clns1aQ61189 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clns1aQ61189 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clns1aQ61189 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clns1aQ61189 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.05■□□□□ 0.48
Clns1aQ61189 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clns1aQ61189 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clns1aQ61189 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clns1aQ61189 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.04■□□□□ 0.48
Clns1aQ61189 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.04■□□□□ 0.48
Clns1aQ61189 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.04■□□□□ 0.48
Clns1aQ61189 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Clns1aQ61189 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Clns1aQ61189 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Clns1aQ61189 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Clns1aQ61189 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clns1aQ61189 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clns1aQ61189 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Clns1aQ61189 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Clns1aQ61189 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clns1aQ61189 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clns1aQ61189 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.03■□□□□ 0.48
Clns1aQ61189 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.03■□□□□ 0.48
Clns1aQ61189 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clns1aQ61189 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Clns1aQ61189 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Clns1aQ61189 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Clns1aQ61189 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.02■□□□□ 0.47
Clns1aQ61189 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.02■□□□□ 0.47
Clns1aQ61189 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms