Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Mir3960-201ENSMUST00000198213 73 ntBASIC17.86■□□□□ 0.45
Scarb1Q61009 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scarb1Q61009 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.86■□□□□ 0.45
Scarb1Q61009 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scarb1Q61009 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Scarb1Q61009 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.86■□□□□ 0.45
Scarb1Q61009 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.86■□□□□ 0.45
Scarb1Q61009 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Scarb1Q61009 Terc-201ENSMUST00000082862 423 ntBASIC17.85■□□□□ 0.45
Scarb1Q61009 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Scarb1Q61009 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Scarb1Q61009 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.84■□□□□ 0.45
Scarb1Q61009 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scarb1Q61009 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Scarb1Q61009 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.84■□□□□ 0.45
Scarb1Q61009 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scarb1Q61009 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scarb1Q61009 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scarb1Q61009 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Scarb1Q61009 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Scarb1Q61009 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Scarb1Q61009 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.84■□□□□ 0.45
Scarb1Q61009 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scarb1Q61009 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scarb1Q61009 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Scarb1Q61009 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scarb1Q61009 Gm8503-201ENSMUST00000118131 455 ntBASIC17.83■□□□□ 0.44
Scarb1Q61009 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scarb1Q61009 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.83■□□□□ 0.44
Scarb1Q61009 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scarb1Q61009 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.83■□□□□ 0.44
Scarb1Q61009 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Scarb1Q61009 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Scarb1Q61009 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.82■□□□□ 0.44
Scarb1Q61009 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Scarb1Q61009 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Scarb1Q61009 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Scarb1Q61009 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.82■□□□□ 0.44
Scarb1Q61009 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Scarb1Q61009 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Scarb1Q61009 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scarb1Q61009 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scarb1Q61009 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scarb1Q61009 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Scarb1Q61009 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.81■□□□□ 0.44
Scarb1Q61009 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scarb1Q61009 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
Scarb1Q61009 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scarb1Q61009 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.8■□□□□ 0.44
Scarb1Q61009 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scarb1Q61009 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scarb1Q61009 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.8■□□□□ 0.44
Scarb1Q61009 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scarb1Q61009 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scarb1Q61009 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scarb1Q61009 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scarb1Q61009 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scarb1Q61009 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scarb1Q61009 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scarb1Q61009 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.79■□□□□ 0.44
Scarb1Q61009 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scarb1Q61009 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Scarb1Q61009 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scarb1Q61009 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scarb1Q61009 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scarb1Q61009 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Scarb1Q61009 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Scarb1Q61009 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Gm45364-201ENSMUST00000210883 159 ntBASIC17.78■□□□□ 0.44
Scarb1Q61009 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Scarb1Q61009 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Scarb1Q61009 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scarb1Q61009 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scarb1Q61009 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scarb1Q61009 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scarb1Q61009 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scarb1Q61009 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scarb1Q61009 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scarb1Q61009 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scarb1Q61009 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scarb1Q61009 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scarb1Q61009 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scarb1Q61009 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scarb1Q61009 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms