Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Shroom1Q5SX79 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.72■■□□□ 1.23
Shroom1Q5SX79 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.71■■□□□ 1.23
Shroom1Q5SX79 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom1Q5SX79 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Shroom1Q5SX79 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom1Q5SX79 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom1Q5SX79 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom1Q5SX79 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom1Q5SX79 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.7■■□□□ 1.22
Shroom1Q5SX79 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Shroom1Q5SX79 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.69■■□□□ 1.22
Shroom1Q5SX79 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom1Q5SX79 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom1Q5SX79 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom1Q5SX79 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Shroom1Q5SX79 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom1Q5SX79 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom1Q5SX79 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Shroom1Q5SX79 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom1Q5SX79 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom1Q5SX79 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom1Q5SX79 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Shroom1Q5SX79 Gm40881-201ENSMUST00000223397 166 ntBASIC22.66■■□□□ 1.22
Shroom1Q5SX79 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom1Q5SX79 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.65■■□□□ 1.22
Shroom1Q5SX79 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom1Q5SX79 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
Shroom1Q5SX79 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.65■■□□□ 1.22
Shroom1Q5SX79 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.65■■□□□ 1.22
Shroom1Q5SX79 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Shroom1Q5SX79 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.65■■□□□ 1.22
Shroom1Q5SX79 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Shroom1Q5SX79 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Shroom1Q5SX79 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Shroom1Q5SX79 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shroom1Q5SX79 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
Shroom1Q5SX79 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Shroom1Q5SX79 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Shroom1Q5SX79 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Shroom1Q5SX79 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.63■■□□□ 1.21
Shroom1Q5SX79 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Shroom1Q5SX79 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.63■■□□□ 1.21
Shroom1Q5SX79 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Shroom1Q5SX79 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Shroom1Q5SX79 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shroom1Q5SX79 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shroom1Q5SX79 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Shroom1Q5SX79 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.6■■□□□ 1.21
Shroom1Q5SX79 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Shroom1Q5SX79 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Gm10399-202ENSMUST00000202768 748 ntBASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Shroom1Q5SX79 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms