Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
R3hdm4Q4VBF2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
R3hdm4Q4VBF2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
R3hdm4Q4VBF2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.13■■□□□ 1.29
R3hdm4Q4VBF2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
R3hdm4Q4VBF2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.13■■□□□ 1.29
R3hdm4Q4VBF2 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.13■■□□□ 1.29
R3hdm4Q4VBF2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3hdm4Q4VBF2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.12■■□□□ 1.29
R3hdm4Q4VBF2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3hdm4Q4VBF2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
R3hdm4Q4VBF2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
R3hdm4Q4VBF2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
R3hdm4Q4VBF2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Gm5812-201ENSMUST00000061073 957 ntBASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
R3hdm4Q4VBF2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
R3hdm4Q4VBF2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
R3hdm4Q4VBF2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
R3hdm4Q4VBF2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
R3hdm4Q4VBF2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
R3hdm4Q4VBF2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
R3hdm4Q4VBF2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
R3hdm4Q4VBF2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
R3hdm4Q4VBF2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
R3hdm4Q4VBF2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.07■■□□□ 1.28
R3hdm4Q4VBF2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
R3hdm4Q4VBF2 Gm8093-201ENSMUST00000128935 1892 ntBASIC23.07■■□□□ 1.28
R3hdm4Q4VBF2 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.06■■□□□ 1.28
R3hdm4Q4VBF2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
R3hdm4Q4VBF2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
R3hdm4Q4VBF2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
R3hdm4Q4VBF2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
R3hdm4Q4VBF2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm4Q4VBF2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
R3hdm4Q4VBF2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm4Q4VBF2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
R3hdm4Q4VBF2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.04■■□□□ 1.28
R3hdm4Q4VBF2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
R3hdm4Q4VBF2 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.04■■□□□ 1.28
R3hdm4Q4VBF2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3hdm4Q4VBF2 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.04■■□□□ 1.28
R3hdm4Q4VBF2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3hdm4Q4VBF2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
R3hdm4Q4VBF2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
R3hdm4Q4VBF2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm4Q4VBF2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
R3hdm4Q4VBF2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm4Q4VBF2 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.03■■□□□ 1.28
R3hdm4Q4VBF2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.03■■□□□ 1.28
R3hdm4Q4VBF2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
R3hdm4Q4VBF2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
R3hdm4Q4VBF2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.27
R3hdm4Q4VBF2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
R3hdm4Q4VBF2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms