Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc4Q3TCX3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc4Q3TCX3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc4Q3TCX3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Khdc4Q3TCX3 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.16■□□□□ 0.82
Khdc4Q3TCX3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.16■□□□□ 0.82
Khdc4Q3TCX3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Khdc4Q3TCX3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Khdc4Q3TCX3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Khdc4Q3TCX3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Khdc4Q3TCX3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Khdc4Q3TCX3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Khdc4Q3TCX3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Khdc4Q3TCX3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Khdc4Q3TCX3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Khdc4Q3TCX3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Khdc4Q3TCX3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Khdc4Q3TCX3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Khdc4Q3TCX3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc4Q3TCX3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc4Q3TCX3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc4Q3TCX3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Khdc4Q3TCX3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc4Q3TCX3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.09■□□□□ 0.81
Khdc4Q3TCX3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Khdc4Q3TCX3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Khdc4Q3TCX3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Khdc4Q3TCX3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Khdc4Q3TCX3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.08■□□□□ 0.81
Khdc4Q3TCX3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.08■□□□□ 0.8
Khdc4Q3TCX3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Khdc4Q3TCX3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc4Q3TCX3 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.07■□□□□ 0.8
Khdc4Q3TCX3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.07■□□□□ 0.8
Khdc4Q3TCX3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.07■□□□□ 0.8
Khdc4Q3TCX3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc4Q3TCX3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc4Q3TCX3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc4Q3TCX3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc4Q3TCX3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms