Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.79■□□□□ 0.76
Cacna1aP97445 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
Cacna1aP97445 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cacna1aP97445 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1aP97445 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1aP97445 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.78■□□□□ 0.76
Cacna1aP97445 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.78■□□□□ 0.76
Cacna1aP97445 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1aP97445 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cacna1aP97445 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.77■□□□□ 0.76
Cacna1aP97445 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1aP97445 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1aP97445 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1aP97445 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1aP97445 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cacna1aP97445 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Cacna1aP97445 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cacna1aP97445 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cacna1aP97445 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1aP97445 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1aP97445 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cacna1aP97445 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cacna1aP97445 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.75■□□□□ 0.75
Cacna1aP97445 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cacna1aP97445 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Cacna1aP97445 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cacna1aP97445 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1aP97445 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.74■□□□□ 0.75
Cacna1aP97445 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cacna1aP97445 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1aP97445 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cacna1aP97445 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1aP97445 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cacna1aP97445 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.73■□□□□ 0.75
Cacna1aP97445 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cacna1aP97445 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.73■□□□□ 0.75
Cacna1aP97445 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1aP97445 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cacna1aP97445 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cacna1aP97445 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1aP97445 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1aP97445 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1aP97445 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1aP97445 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1aP97445 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1aP97445 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cacna1aP97445 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.72■□□□□ 0.75
Cacna1aP97445 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.72■□□□□ 0.75
Cacna1aP97445 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1aP97445 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cacna1aP97445 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1aP97445 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1aP97445 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.71■□□□□ 0.75
Cacna1aP97445 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.71■□□□□ 0.75
Cacna1aP97445 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1aP97445 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cacna1aP97445 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1aP97445 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1aP97445 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1aP97445 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cacna1aP97445 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.7■□□□□ 0.74
Cacna1aP97445 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.7■□□□□ 0.74
Cacna1aP97445 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1aP97445 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cacna1aP97445 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1aP97445 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Cacna1aP97445 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1aP97445 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1aP97445 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cacna1aP97445 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1aP97445 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1aP97445 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cacna1aP97445 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cacna1aP97445 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Gm6139-201ENSMUST00000079261 882 ntBASIC19.67■□□□□ 0.74
Cacna1aP97445 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cacna1aP97445 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.67■□□□□ 0.74
Cacna1aP97445 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.66■□□□□ 0.74
Cacna1aP97445 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Cacna1aP97445 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cacna1aP97445 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Cacna1aP97445 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms