Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn18P56857 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cldn18P56857 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn18P56857 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn18P56857 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn18P56857 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn18P56857 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cldn18P56857 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn18P56857 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn18P56857 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cldn18P56857 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cldn18P56857 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn18P56857 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn18P56857 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn18P56857 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn18P56857 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn18P56857 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.14■□□□□ 0.65
Cldn18P56857 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn18P56857 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Cldn18P56857 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn18P56857 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn18P56857 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldn18P56857 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.14■□□□□ 0.65
Cldn18P56857 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cldn18P56857 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn18P56857 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.14■□□□□ 0.65
Cldn18P56857 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn18P56857 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn18P56857 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.13■□□□□ 0.65
Cldn18P56857 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn18P56857 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cldn18P56857 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn18P56857 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn18P56857 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn18P56857 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn18P56857 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.13■□□□□ 0.65
Cldn18P56857 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn18P56857 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn18P56857 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.12■□□□□ 0.65
Cldn18P56857 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn18P56857 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.12■□□□□ 0.65
Cldn18P56857 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn18P56857 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Cldn18P56857 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn18P56857 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.12■□□□□ 0.65
Cldn18P56857 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Cldn18P56857 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn18P56857 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cldn18P56857 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn18P56857 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cldn18P56857 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn18P56857 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn18P56857 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn18P56857 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn18P56857 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Cldn18P56857 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn18P56857 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn18P56857 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn18P56857 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn18P56857 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Cldn18P56857 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn18P56857 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn18P56857 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn18P56857 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.09■□□□□ 0.65
Cldn18P56857 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Cldn18P56857 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Cldn18P56857 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn18P56857 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.09■□□□□ 0.65
Cldn18P56857 Gm5812-201ENSMUST00000061073 957 ntBASIC19.09■□□□□ 0.65
Cldn18P56857 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn18P56857 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.09■□□□□ 0.65
Cldn18P56857 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn18P56857 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn18P56857 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.09■□□□□ 0.65
Cldn18P56857 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Cldn18P56857 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn18P56857 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn18P56857 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.08■□□□□ 0.64
Cldn18P56857 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.08■□□□□ 0.64
Cldn18P56857 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn18P56857 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn18P56857 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.08■□□□□ 0.64
Cldn18P56857 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn18P56857 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn18P56857 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.07■□□□□ 0.64
Cldn18P56857 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn18P56857 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn18P56857 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cldn18P56857 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn18P56857 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cldn18P56857 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.07■□□□□ 0.64
Cldn18P56857 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn18P56857 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
Cldn18P56857 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn18P56857 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn18P56857 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cldn18P56857 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn18P56857 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn18P56857 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cldn18P56857 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms