Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr8P56484 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccr8P56484 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccr8P56484 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr8P56484 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccr8P56484 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ccr8P56484 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccr8P56484 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.3■□□□□ 0.52
Ccr8P56484 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr8P56484 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.3■□□□□ 0.52
Ccr8P56484 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.3■□□□□ 0.52
Ccr8P56484 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Ccr8P56484 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr8P56484 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr8P56484 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr8P56484 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr8P56484 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccr8P56484 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr8P56484 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ccr8P56484 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr8P56484 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.27■□□□□ 0.52
Ccr8P56484 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ccr8P56484 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccr8P56484 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccr8P56484 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Ccr8P56484 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Ccr8P56484 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccr8P56484 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccr8P56484 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccr8P56484 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccr8P56484 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccr8P56484 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccr8P56484 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ccr8P56484 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.26■□□□□ 0.51
Ccr8P56484 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccr8P56484 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr8P56484 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccr8P56484 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr8P56484 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr8P56484 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr8P56484 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr8P56484 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr8P56484 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccr8P56484 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccr8P56484 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.24■□□□□ 0.51
Ccr8P56484 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.24■□□□□ 0.51
Ccr8P56484 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.24■□□□□ 0.51
Ccr8P56484 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccr8P56484 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccr8P56484 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccr8P56484 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccr8P56484 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccr8P56484 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccr8P56484 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccr8P56484 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccr8P56484 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccr8P56484 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccr8P56484 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccr8P56484 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.21■□□□□ 0.51
Ccr8P56484 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.21■□□□□ 0.51
Ccr8P56484 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ccr8P56484 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.21■□□□□ 0.51
Ccr8P56484 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccr8P56484 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccr8P56484 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccr8P56484 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccr8P56484 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ccr8P56484 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.2■□□□□ 0.5
Ccr8P56484 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.2■□□□□ 0.5
Ccr8P56484 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccr8P56484 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccr8P56484 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccr8P56484 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms