Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
Cdh4P39038 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cdh4P39038 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh4P39038 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdh4P39038 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh4P39038 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Cdh4P39038 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdh4P39038 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.33■□□□□ 0.85
Cdh4P39038 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh4P39038 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.33■□□□□ 0.85
Cdh4P39038 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh4P39038 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh4P39038 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cdh4P39038 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh4P39038 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cdh4P39038 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cdh4P39038 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh4P39038 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh4P39038 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cdh4P39038 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cdh4P39038 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cdh4P39038 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
Cdh4P39038 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh4P39038 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh4P39038 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh4P39038 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
Cdh4P39038 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh4P39038 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh4P39038 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.31■□□□□ 0.84
Cdh4P39038 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.31■□□□□ 0.84
Cdh4P39038 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cdh4P39038 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh4P39038 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh4P39038 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh4P39038 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cdh4P39038 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh4P39038 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh4P39038 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh4P39038 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh4P39038 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh4P39038 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh4P39038 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh4P39038 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.29■□□□□ 0.84
Cdh4P39038 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh4P39038 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh4P39038 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdh4P39038 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh4P39038 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.28■□□□□ 0.84
Cdh4P39038 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh4P39038 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.28■□□□□ 0.84
Cdh4P39038 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdh4P39038 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh4P39038 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh4P39038 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh4P39038 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh4P39038 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh4P39038 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh4P39038 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Cdh4P39038 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh4P39038 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh4P39038 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.27■□□□□ 0.84
Cdh4P39038 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.27■□□□□ 0.84
Cdh4P39038 Gm15546-201ENSMUST00000122095 826 ntBASIC20.27■□□□□ 0.84
Cdh4P39038 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.27■□□□□ 0.84
Cdh4P39038 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh4P39038 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdh4P39038 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.27■□□□□ 0.84
Cdh4P39038 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh4P39038 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cdh4P39038 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cdh4P39038 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Cdh4P39038 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Cdh4P39038 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cdh4P39038 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Cdh4P39038 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh4P39038 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh4P39038 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cdh4P39038 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cdh4P39038 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh4P39038 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh4P39038 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cdh4P39038 Gm10232-201ENSMUST00000089221 720 ntBASIC20.25■□□□□ 0.83
Cdh4P39038 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh4P39038 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh4P39038 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms