Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.78■■□□□ 1.08
PdgfbP31240 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PdgfbP31240 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.77■■□□□ 1.08
PdgfbP31240 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.77■■□□□ 1.08
PdgfbP31240 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PdgfbP31240 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PdgfbP31240 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PdgfbP31240 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PdgfbP31240 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PdgfbP31240 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PdgfbP31240 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PdgfbP31240 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.76■■□□□ 1.07
PdgfbP31240 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PdgfbP31240 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PdgfbP31240 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PdgfbP31240 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PdgfbP31240 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.75■■□□□ 1.07
PdgfbP31240 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PdgfbP31240 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PdgfbP31240 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PdgfbP31240 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
PdgfbP31240 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PdgfbP31240 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PdgfbP31240 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.75■■□□□ 1.07
PdgfbP31240 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
PdgfbP31240 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.74■■□□□ 1.07
PdgfbP31240 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.74■■□□□ 1.07
PdgfbP31240 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PdgfbP31240 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PdgfbP31240 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PdgfbP31240 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PdgfbP31240 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PdgfbP31240 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
PdgfbP31240 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PdgfbP31240 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PdgfbP31240 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PdgfbP31240 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
PdgfbP31240 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PdgfbP31240 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PdgfbP31240 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PdgfbP31240 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.7■■□□□ 1.06
PdgfbP31240 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PdgfbP31240 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.7■■□□□ 1.06
PdgfbP31240 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PdgfbP31240 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PdgfbP31240 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PdgfbP31240 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PdgfbP31240 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PdgfbP31240 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PdgfbP31240 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PdgfbP31240 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.69■■□□□ 1.06
PdgfbP31240 Gm43017-201ENSMUST00000198296 752 ntBASIC21.69■■□□□ 1.06
PdgfbP31240 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PdgfbP31240 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfbP31240 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfbP31240 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfbP31240 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.68■■□□□ 1.06
PdgfbP31240 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.68■■□□□ 1.06
PdgfbP31240 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfbP31240 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
PdgfbP31240 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PdgfbP31240 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfbP31240 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfbP31240 Gm43137-201ENSMUST00000198052 594 ntBASIC21.67■■□□□ 1.06
PdgfbP31240 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfbP31240 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PdgfbP31240 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.66■■□□□ 1.06
PdgfbP31240 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PdgfbP31240 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PdgfbP31240 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PdgfbP31240 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PdgfbP31240 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfbP31240 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfbP31240 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PdgfbP31240 Mir7075-201ENSMUST00000184187 82 ntBASIC21.63■■□□□ 1.05
PdgfbP31240 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PdgfbP31240 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfbP31240 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PdgfbP31240 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfbP31240 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.62■■□□□ 1.05
PdgfbP31240 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.62■■□□□ 1.05
PdgfbP31240 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfbP31240 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfbP31240 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfbP31240 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfbP31240 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PdgfbP31240 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PdgfbP31240 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms