Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cd40lgP27548 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40lgP27548 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40lgP27548 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cd40lgP27548 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Cd40lgP27548 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40lgP27548 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40lgP27548 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cd40lgP27548 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd40lgP27548 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cd40lgP27548 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd40lgP27548 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd40lgP27548 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cd40lgP27548 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.45■□□□□ 0.7
Cd40lgP27548 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cd40lgP27548 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.45■□□□□ 0.7
Cd40lgP27548 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Cd40lgP27548 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.45■□□□□ 0.7
Cd40lgP27548 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.45■□□□□ 0.7
Cd40lgP27548 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40lgP27548 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40lgP27548 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40lgP27548 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40lgP27548 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
Cd40lgP27548 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.44■□□□□ 0.7
Cd40lgP27548 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40lgP27548 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40lgP27548 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cd40lgP27548 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Cd40lgP27548 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40lgP27548 Gm43566-201ENSMUST00000196851 808 ntBASIC19.43■□□□□ 0.7
Cd40lgP27548 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40lgP27548 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40lgP27548 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cd40lgP27548 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40lgP27548 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40lgP27548 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40lgP27548 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cd40lgP27548 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40lgP27548 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40lgP27548 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40lgP27548 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd40lgP27548 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Cd40lgP27548 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40lgP27548 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cd40lgP27548 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.41■□□□□ 0.7
Cd40lgP27548 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.41■□□□□ 0.7
Cd40lgP27548 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40lgP27548 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40lgP27548 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40lgP27548 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cd40lgP27548 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40lgP27548 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40lgP27548 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cd40lgP27548 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd40lgP27548 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40lgP27548 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40lgP27548 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cd40lgP27548 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cd40lgP27548 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40lgP27548 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Cd40lgP27548 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40lgP27548 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40lgP27548 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cd40lgP27548 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cd40lgP27548 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd40lgP27548 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cd40lgP27548 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd40lgP27548 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cd40lgP27548 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd40lgP27548 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.39■□□□□ 0.69
Cd40lgP27548 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.39■□□□□ 0.69
Cd40lgP27548 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd40lgP27548 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd40lgP27548 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cd40lgP27548 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cd40lgP27548 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cd40lgP27548 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cd40lgP27548 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cd40lgP27548 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd40lgP27548 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.37■□□□□ 0.69
Cd40lgP27548 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.37■□□□□ 0.69
Cd40lgP27548 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cd40lgP27548 Gm5812-201ENSMUST00000061073 957 ntBASIC19.37■□□□□ 0.69
Cd40lgP27548 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd40lgP27548 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd40lgP27548 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.36■□□□□ 0.69
Cd40lgP27548 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.36■□□□□ 0.69
Cd40lgP27548 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd40lgP27548 Gm22567-201ENSMUST00000175542 342 ntBASIC19.35■□□□□ 0.69
Cd40lgP27548 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40lgP27548 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd40lgP27548 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms