Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
NclP09405 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC31.72■■■□□ 2.67
NclP09405 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NclP09405 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
NclP09405 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
NclP09405 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
NclP09405 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
NclP09405 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
NclP09405 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.7■■■□□ 2.67
NclP09405 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NclP09405 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NclP09405 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
NclP09405 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NclP09405 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
NclP09405 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NclP09405 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NclP09405 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NclP09405 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC31.68■■■□□ 2.66
NclP09405 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NclP09405 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NclP09405 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NclP09405 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
NclP09405 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NclP09405 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC31.66■■■□□ 2.66
NclP09405 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NclP09405 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
NclP09405 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NclP09405 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NclP09405 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
NclP09405 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC31.65■■■□□ 2.66
NclP09405 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NclP09405 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
NclP09405 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
NclP09405 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
NclP09405 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC31.64■■■□□ 2.66
NclP09405 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC31.64■■■□□ 2.66
NclP09405 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NclP09405 Gm22238-201ENSMUST00000175222 88 ntBASIC31.63■■■□□ 2.65
NclP09405 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NclP09405 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC31.62■■■□□ 2.65
NclP09405 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NclP09405 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC31.62■■■□□ 2.65
NclP09405 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
NclP09405 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NclP09405 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
NclP09405 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
NclP09405 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.61■■■□□ 2.65
NclP09405 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NclP09405 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NclP09405 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
NclP09405 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
NclP09405 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
NclP09405 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NclP09405 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
NclP09405 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
NclP09405 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NclP09405 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NclP09405 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NclP09405 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
NclP09405 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NclP09405 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NclP09405 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
NclP09405 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NclP09405 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NclP09405 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NclP09405 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NclP09405 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
NclP09405 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
NclP09405 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
NclP09405 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
NclP09405 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
NclP09405 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
NclP09405 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
NclP09405 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NclP09405 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NclP09405 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NclP09405 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
NclP09405 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NclP09405 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NclP09405 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
NclP09405 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
NclP09405 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NclP09405 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
NclP09405 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NclP09405 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC31.52■■■□□ 2.64
NclP09405 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC31.52■■■□□ 2.64
NclP09405 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC31.52■■■□□ 2.64
NclP09405 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC31.52■■■□□ 2.64
NclP09405 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NclP09405 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
NclP09405 Gm10620-201ENSMUST00000098379 1332 ntBASIC31.5■■■□□ 2.63
NclP09405 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NclP09405 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC31.5■■■□□ 2.63
NclP09405 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NclP09405 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC31.5■■■□□ 2.63
NclP09405 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
NclP09405 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
NclP09405 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
NclP09405 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
NclP09405 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms