Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ercc1P07903 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ercc1P07903 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ercc1P07903 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc1P07903 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.74■□□□□ 0.43
Ercc1P07903 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ercc1P07903 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc1P07903 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.74■□□□□ 0.43
Ercc1P07903 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ercc1P07903 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ercc1P07903 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc1P07903 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc1P07903 Gm11599-201ENSMUST00000118720 878 ntBASIC17.73■□□□□ 0.43
Ercc1P07903 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc1P07903 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Ercc1P07903 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.73■□□□□ 0.43
Ercc1P07903 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.73■□□□□ 0.43
Ercc1P07903 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc1P07903 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ercc1P07903 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Ercc1P07903 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc1P07903 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.72■□□□□ 0.43
Ercc1P07903 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.72■□□□□ 0.43
Ercc1P07903 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc1P07903 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ercc1P07903 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.71■□□□□ 0.43
Ercc1P07903 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ercc1P07903 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ercc1P07903 Notumos-201ENSMUST00000151998 2659 ntBASIC17.71■□□□□ 0.43
Ercc1P07903 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ercc1P07903 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ercc1P07903 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ercc1P07903 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc1P07903 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc1P07903 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ercc1P07903 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.7■□□□□ 0.42
Ercc1P07903 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc1P07903 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ercc1P07903 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ercc1P07903 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.69■□□□□ 0.42
Ercc1P07903 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.69■□□□□ 0.42
Ercc1P07903 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ercc1P07903 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.69■□□□□ 0.42
Ercc1P07903 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ercc1P07903 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc1P07903 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc1P07903 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc1P07903 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.67■□□□□ 0.42
Ercc1P07903 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.67■□□□□ 0.42
Ercc1P07903 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ercc1P07903 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ercc1P07903 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ercc1P07903 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ercc1P07903 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Gm4799-201ENSMUST00000095396 657 ntBASIC17.66■□□□□ 0.42
Ercc1P07903 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.66■□□□□ 0.42
Ercc1P07903 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ercc1P07903 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ercc1P07903 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ercc1P07903 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc1P07903 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ercc1P07903 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.65■□□□□ 0.42
Ercc1P07903 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms