Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ttc3O88196 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.73■■□□□ 1.23
Ttc3O88196 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ttc3O88196 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.72■■□□□ 1.23
Ttc3O88196 Gm21956-201ENSMUST00000179946 522 ntBASIC22.72■■□□□ 1.23
Ttc3O88196 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ttc3O88196 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ttc3O88196 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
Ttc3O88196 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ttc3O88196 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ttc3O88196 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Ttc3O88196 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Ttc3O88196 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ttc3O88196 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Ttc3O88196 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ttc3O88196 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ttc3O88196 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.7■■□□□ 1.23
Ttc3O88196 Gm40881-201ENSMUST00000223397 166 ntBASIC22.7■■□□□ 1.23
Ttc3O88196 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Ttc3O88196 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
Ttc3O88196 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ttc3O88196 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.7■■□□□ 1.22
Ttc3O88196 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.7■■□□□ 1.22
Ttc3O88196 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ttc3O88196 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ttc3O88196 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc3O88196 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Ttc3O88196 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.69■■□□□ 1.22
Ttc3O88196 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc3O88196 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc3O88196 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc3O88196 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.69■■□□□ 1.22
Ttc3O88196 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc3O88196 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc3O88196 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc3O88196 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc3O88196 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc3O88196 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc3O88196 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc3O88196 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc3O88196 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.68■■□□□ 1.22
Ttc3O88196 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc3O88196 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ttc3O88196 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ttc3O88196 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Ttc3O88196 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ttc3O88196 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ttc3O88196 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC22.67■■□□□ 1.22
Ttc3O88196 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Ttc3O88196 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ttc3O88196 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ttc3O88196 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ttc3O88196 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.66■■□□□ 1.22
Ttc3O88196 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ttc3O88196 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ttc3O88196 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ttc3O88196 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.66■■□□□ 1.22
Ttc3O88196 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ttc3O88196 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ttc3O88196 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ttc3O88196 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.64■■□□□ 1.22
Ttc3O88196 Gm12922-201ENSMUST00000120626 809 ntBASIC22.64■■□□□ 1.21
Ttc3O88196 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ttc3O88196 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.64■■□□□ 1.21
Ttc3O88196 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ttc3O88196 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.64■■□□□ 1.21
Ttc3O88196 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ttc3O88196 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ttc3O88196 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc3O88196 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc3O88196 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.63■■□□□ 1.21
Ttc3O88196 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Ttc3O88196 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc3O88196 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc3O88196 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc3O88196 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc3O88196 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc3O88196 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ttc3O88196 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ttc3O88196 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ttc3O88196 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ttc3O88196 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc3O88196 Gm13241-201ENSMUST00000094493 780 ntBASIC22.61■■□□□ 1.21
Ttc3O88196 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc3O88196 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc3O88196 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc3O88196 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc3O88196 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc3O88196 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.6■■□□□ 1.21
Ttc3O88196 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc3O88196 Gm9847-201ENSMUST00000052528 599 ntBASIC22.59■■□□□ 1.21
Ttc3O88196 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ttc3O88196 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms