Protein–RNA interactions for Protein: O55144

Tlx3, T-cell leukemia homeobox protein 3, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlx3O55144 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tlx3O55144 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlx3O55144 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tlx3O55144 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tlx3O55144 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlx3O55144 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Tlx3O55144 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.56■□□□□ 0.88
Tlx3O55144 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tlx3O55144 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tlx3O55144 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
Tlx3O55144 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.55■□□□□ 0.88
Tlx3O55144 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tlx3O55144 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tlx3O55144 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tlx3O55144 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tlx3O55144 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tlx3O55144 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.54■□□□□ 0.88
Tlx3O55144 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.54■□□□□ 0.88
Tlx3O55144 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.54■□□□□ 0.88
Tlx3O55144 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.54■□□□□ 0.88
Tlx3O55144 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tlx3O55144 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tlx3O55144 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tlx3O55144 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.53■□□□□ 0.88
Tlx3O55144 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tlx3O55144 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlx3O55144 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tlx3O55144 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlx3O55144 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tlx3O55144 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tlx3O55144 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.53■□□□□ 0.88
Tlx3O55144 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlx3O55144 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlx3O55144 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tlx3O55144 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tlx3O55144 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tlx3O55144 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlx3O55144 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tlx3O55144 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tlx3O55144 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tlx3O55144 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tlx3O55144 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tlx3O55144 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Tlx3O55144 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.51■□□□□ 0.87
Tlx3O55144 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tlx3O55144 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.51■□□□□ 0.87
Tlx3O55144 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tlx3O55144 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Tlx3O55144 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tlx3O55144 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.5■□□□□ 0.87
Tlx3O55144 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tlx3O55144 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tlx3O55144 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.48■□□□□ 0.87
Tlx3O55144 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.48■□□□□ 0.87
Tlx3O55144 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tlx3O55144 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tlx3O55144 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlx3O55144 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlx3O55144 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlx3O55144 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlx3O55144 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlx3O55144 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.47■□□□□ 0.87
Tlx3O55144 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
Tlx3O55144 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.47■□□□□ 0.87
Tlx3O55144 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tlx3O55144 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.46■□□□□ 0.87
Tlx3O55144 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.46■□□□□ 0.87
Tlx3O55144 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tlx3O55144 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Tlx3O55144 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.46■□□□□ 0.87
Tlx3O55144 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.46■□□□□ 0.87
Tlx3O55144 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlx3O55144 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tlx3O55144 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlx3O55144 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlx3O55144 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tlx3O55144 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Tlx3O55144 Gm6139-201ENSMUST00000079261 882 ntBASIC20.45■□□□□ 0.86
Tlx3O55144 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlx3O55144 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Tlx3O55144 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Tlx3O55144 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tlx3O55144 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlx3O55144 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
Tlx3O55144 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlx3O55144 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.44■□□□□ 0.86
Tlx3O55144 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tlx3O55144 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlx3O55144 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tlx3O55144 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tlx3O55144 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tlx3O55144 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlx3O55144 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlx3O55144 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlx3O55144 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlx3O55144 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.43■□□□□ 0.86
Tlx3O55144 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tlx3O55144 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Tlx3O55144 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Tlx3O55144 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms