Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.55■□□□□ 0.4
SncaO55042 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
SncaO55042 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.55■□□□□ 0.4
SncaO55042 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SncaO55042 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.54■□□□□ 0.4
SncaO55042 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.54■□□□□ 0.4
SncaO55042 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SncaO55042 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.54■□□□□ 0.4
SncaO55042 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SncaO55042 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SncaO55042 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SncaO55042 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SncaO55042 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SncaO55042 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SncaO55042 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.53■□□□□ 0.4
SncaO55042 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SncaO55042 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SncaO55042 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.53■□□□□ 0.4
SncaO55042 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SncaO55042 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SncaO55042 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SncaO55042 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SncaO55042 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SncaO55042 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SncaO55042 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SncaO55042 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.52■□□□□ 0.4
SncaO55042 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SncaO55042 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SncaO55042 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SncaO55042 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SncaO55042 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SncaO55042 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SncaO55042 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SncaO55042 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SncaO55042 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SncaO55042 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SncaO55042 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SncaO55042 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.5■□□□□ 0.39
SncaO55042 Scarna2-201ENSMUST00000157560 414 ntBASIC17.5■□□□□ 0.39
SncaO55042 Gm9806-201ENSMUST00000051080 552 ntBASIC17.5■□□□□ 0.39
SncaO55042 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SncaO55042 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SncaO55042 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SncaO55042 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.5■□□□□ 0.39
SncaO55042 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SncaO55042 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SncaO55042 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SncaO55042 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SncaO55042 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SncaO55042 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SncaO55042 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.49■□□□□ 0.39
SncaO55042 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.49■□□□□ 0.39
SncaO55042 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SncaO55042 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SncaO55042 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SncaO55042 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SncaO55042 Notumos-201ENSMUST00000151998 2659 ntBASIC17.48■□□□□ 0.39
SncaO55042 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.48■□□□□ 0.39
SncaO55042 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SncaO55042 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.48■□□□□ 0.39
SncaO55042 Gm16437-201ENSMUST00000025669 507 ntBASIC17.48■□□□□ 0.39
SncaO55042 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SncaO55042 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SncaO55042 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SncaO55042 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.47■□□□□ 0.39
SncaO55042 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SncaO55042 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SncaO55042 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.47■□□□□ 0.39
SncaO55042 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SncaO55042 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.47■□□□□ 0.39
SncaO55042 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.47■□□□□ 0.39
SncaO55042 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SncaO55042 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SncaO55042 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SncaO55042 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SncaO55042 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms