Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
DffbO54788 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DffbO54788 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DffbO54788 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.2■□□□□ 0.5
DffbO54788 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DffbO54788 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DffbO54788 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.2■□□□□ 0.5
DffbO54788 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DffbO54788 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.19■□□□□ 0.5
DffbO54788 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DffbO54788 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DffbO54788 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.19■□□□□ 0.5
DffbO54788 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DffbO54788 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DffbO54788 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DffbO54788 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.18■□□□□ 0.5
DffbO54788 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.18■□□□□ 0.5
DffbO54788 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DffbO54788 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.18■□□□□ 0.5
DffbO54788 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DffbO54788 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DffbO54788 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DffbO54788 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DffbO54788 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DffbO54788 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DffbO54788 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DffbO54788 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DffbO54788 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.17■□□□□ 0.5
DffbO54788 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DffbO54788 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DffbO54788 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
DffbO54788 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.16■□□□□ 0.5
DffbO54788 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DffbO54788 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.16■□□□□ 0.5
DffbO54788 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DffbO54788 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DffbO54788 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DffbO54788 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DffbO54788 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
DffbO54788 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DffbO54788 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DffbO54788 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DffbO54788 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.15■□□□□ 0.5
DffbO54788 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DffbO54788 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DffbO54788 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DffbO54788 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.14■□□□□ 0.49
DffbO54788 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.14■□□□□ 0.49
DffbO54788 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.14■□□□□ 0.49
DffbO54788 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DffbO54788 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DffbO54788 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DffbO54788 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DffbO54788 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
DffbO54788 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.13■□□□□ 0.49
DffbO54788 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DffbO54788 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DffbO54788 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DffbO54788 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DffbO54788 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DffbO54788 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DffbO54788 Scarna2-201ENSMUST00000157560 414 ntBASIC18.12■□□□□ 0.49
DffbO54788 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
DffbO54788 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
DffbO54788 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
DffbO54788 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DffbO54788 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
DffbO54788 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Gm16437-201ENSMUST00000025669 507 ntBASIC18.11■□□□□ 0.49
DffbO54788 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
DffbO54788 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DffbO54788 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DffbO54788 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DffbO54788 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DffbO54788 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.1■□□□□ 0.49
DffbO54788 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DffbO54788 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DffbO54788 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.1■□□□□ 0.49
DffbO54788 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms