Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rundc3aO08576 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rundc3aO08576 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rundc3aO08576 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rundc3aO08576 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rundc3aO08576 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rundc3aO08576 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rundc3aO08576 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rundc3aO08576 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rundc3aO08576 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rundc3aO08576 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rundc3aO08576 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.69■□□□□ 0.9
Rundc3aO08576 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rundc3aO08576 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rundc3aO08576 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rundc3aO08576 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rundc3aO08576 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rundc3aO08576 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rundc3aO08576 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rundc3aO08576 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rundc3aO08576 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.68■□□□□ 0.9
Rundc3aO08576 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rundc3aO08576 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rundc3aO08576 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rundc3aO08576 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.67■□□□□ 0.9
Rundc3aO08576 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rundc3aO08576 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rundc3aO08576 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rundc3aO08576 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3aO08576 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3aO08576 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3aO08576 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Rundc3aO08576 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3aO08576 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3aO08576 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rundc3aO08576 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rundc3aO08576 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rundc3aO08576 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3aO08576 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rundc3aO08576 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3aO08576 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.65■□□□□ 0.9
Rundc3aO08576 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3aO08576 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3aO08576 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rundc3aO08576 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3aO08576 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3aO08576 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rundc3aO08576 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rundc3aO08576 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.64■□□□□ 0.9
Rundc3aO08576 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Rundc3aO08576 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3aO08576 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3aO08576 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3aO08576 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rundc3aO08576 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3aO08576 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rundc3aO08576 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rundc3aO08576 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rundc3aO08576 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rundc3aO08576 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rundc3aO08576 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rundc3aO08576 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rundc3aO08576 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3aO08576 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rundc3aO08576 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3aO08576 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3aO08576 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3aO08576 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.62■□□□□ 0.89
Rundc3aO08576 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rundc3aO08576 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.61■□□□□ 0.89
Rundc3aO08576 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.61■□□□□ 0.89
Rundc3aO08576 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rundc3aO08576 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.61■□□□□ 0.89
Rundc3aO08576 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rundc3aO08576 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms