Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm21788J3QNH3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm21788J3QNH3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm21788J3QNH3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18■□□□□ 0.47
Gm21788J3QNH3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18■□□□□ 0.47
Gm21788J3QNH3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gm21788J3QNH3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm21788J3QNH3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18■□□□□ 0.47
Gm21788J3QNH3 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.99■□□□□ 0.47
Gm21788J3QNH3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm21788J3QNH3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm21788J3QNH3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21788J3QNH3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21788J3QNH3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.97■□□□□ 0.47
Gm21788J3QNH3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Gm21788J3QNH3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm21788J3QNH3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm21788J3QNH3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm21788J3QNH3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21788J3QNH3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21788J3QNH3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21788J3QNH3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Gm21788J3QNH3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21788J3QNH3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm21788J3QNH3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.95■□□□□ 0.46
Gm21788J3QNH3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.94■□□□□ 0.46
Gm21788J3QNH3 Gm14523-201ENSMUST00000117260 558 ntBASIC17.94■□□□□ 0.46
Gm21788J3QNH3 Gm27502-201ENSMUST00000183495 199 ntBASIC17.94■□□□□ 0.46
Gm21788J3QNH3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm21788J3QNH3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm21788J3QNH3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Gm21788J3QNH3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Gm21788J3QNH3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm21788J3QNH3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Gm11175-201ENSMUST00000116172 543 ntBASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm21788J3QNH3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm21788J3QNH3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm21788J3QNH3 Gm7332-201ENSMUST00000118351 454 ntBASIC17.9■□□□□ 0.46
Gm21788J3QNH3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm21788J3QNH3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm21788J3QNH3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms