Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm7417-201ENSMUST00000192950 473 ntBASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdh17E9PXF0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh17E9PXF0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh17E9PXF0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh17E9PXF0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.78■□□□□ 0.76
Pcdh17E9PXF0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh17E9PXF0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdh17E9PXF0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
Pcdh17E9PXF0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh17E9PXF0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.77■□□□□ 0.76
Pcdh17E9PXF0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.77■□□□□ 0.76
Pcdh17E9PXF0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Pcdh17E9PXF0 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.77■□□□□ 0.76
Pcdh17E9PXF0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Pcdh17E9PXF0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Pcdh17E9PXF0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.76■□□□□ 0.75
Pcdh17E9PXF0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh17E9PXF0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh17E9PXF0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh17E9PXF0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh17E9PXF0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh17E9PXF0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh17E9PXF0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh17E9PXF0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdh17E9PXF0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh17E9PXF0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh17E9PXF0 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Gm40881-201ENSMUST00000223397 166 ntBASIC19.72■□□□□ 0.75
Pcdh17E9PXF0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh17E9PXF0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh17E9PXF0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pcdh17E9PXF0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh17E9PXF0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh17E9PXF0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh17E9PXF0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh17E9PXF0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh17E9PXF0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdh17E9PXF0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms