Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smim17A0A504 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smim17A0A504 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smim17A0A504 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smim17A0A504 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smim17A0A504 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smim17A0A504 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smim17A0A504 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smim17A0A504 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.29■□□□□ 0.68
Smim17A0A504 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smim17A0A504 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim17A0A504 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim17A0A504 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smim17A0A504 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim17A0A504 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim17A0A504 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim17A0A504 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.28■□□□□ 0.68
Smim17A0A504 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim17A0A504 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim17A0A504 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smim17A0A504 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smim17A0A504 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim17A0A504 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.28■□□□□ 0.68
Smim17A0A504 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim17A0A504 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim17A0A504 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smim17A0A504 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim17A0A504 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim17A0A504 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim17A0A504 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim17A0A504 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.25■□□□□ 0.67
Smim17A0A504 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim17A0A504 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smim17A0A504 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.25■□□□□ 0.67
Smim17A0A504 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim17A0A504 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim17A0A504 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim17A0A504 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smim17A0A504 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smim17A0A504 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.24■□□□□ 0.67
Smim17A0A504 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim17A0A504 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smim17A0A504 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim17A0A504 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim17A0A504 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Smim17A0A504 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim17A0A504 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim17A0A504 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smim17A0A504 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim17A0A504 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.22■□□□□ 0.67
Smim17A0A504 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim17A0A504 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim17A0A504 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.21■□□□□ 0.67
Smim17A0A504 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.21■□□□□ 0.67
Smim17A0A504 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Gm24970-201ENSMUST00000175582 82 ntBASIC19.21■□□□□ 0.67
Smim17A0A504 Gm9397-201ENSMUST00000200125 605 ntBASIC19.21■□□□□ 0.67
Smim17A0A504 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim17A0A504 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Smim17A0A504 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim17A0A504 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim17A0A504 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smim17A0A504 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim17A0A504 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.2■□□□□ 0.66
Smim17A0A504 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim17A0A504 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim17A0A504 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim17A0A504 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim17A0A504 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim17A0A504 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim17A0A504 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim17A0A504 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smim17A0A504 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.18■□□□□ 0.66
Smim17A0A504 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim17A0A504 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.18■□□□□ 0.66
Smim17A0A504 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim17A0A504 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.17■□□□□ 0.66
Smim17A0A504 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smim17A0A504 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim17A0A504 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim17A0A504 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim17A0A504 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim17A0A504 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms