Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv17A0A140T8P8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv17A0A140T8P8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv17A0A140T8P8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv17A0A140T8P8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv17A0A140T8P8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv17A0A140T8P8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv17A0A140T8P8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trbv17A0A140T8P8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv17A0A140T8P8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv17A0A140T8P8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv17A0A140T8P8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Gm22567-201ENSMUST00000175542 342 ntBASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbv17A0A140T8P8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trbv17A0A140T8P8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv17A0A140T8P8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trbv17A0A140T8P8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv17A0A140T8P8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv17A0A140T8P8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv17A0A140T8P8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trbv17A0A140T8P8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv17A0A140T8P8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms