Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc194A0A140LIT1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc194A0A140LIT1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc194A0A140LIT1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc194A0A140LIT1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc194A0A140LIT1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccdc194A0A140LIT1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.14■□□□□ 0.97
Ccdc194A0A140LIT1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc194A0A140LIT1 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.13■□□□□ 0.97
Ccdc194A0A140LIT1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc194A0A140LIT1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc194A0A140LIT1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc194A0A140LIT1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc194A0A140LIT1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccdc194A0A140LIT1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccdc194A0A140LIT1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc194A0A140LIT1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc194A0A140LIT1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc194A0A140LIT1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc194A0A140LIT1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc194A0A140LIT1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc194A0A140LIT1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc194A0A140LIT1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc194A0A140LIT1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Ccdc194A0A140LIT1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc194A0A140LIT1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.05■□□□□ 0.96
Ccdc194A0A140LIT1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc194A0A140LIT1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc194A0A140LIT1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc194A0A140LIT1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc194A0A140LIT1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccdc194A0A140LIT1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc194A0A140LIT1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.04■□□□□ 0.96
Ccdc194A0A140LIT1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccdc194A0A140LIT1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc194A0A140LIT1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms