Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav15d-2-dv6d-2A0A0G2JGQ7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.64■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.59■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27502-201ENSMUST00000183495 199 ntBASIC18.58■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav15d-2-dv6d-2A0A0G2JGQ7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms