Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-78A0A0G2JGN3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ighv1-78A0A0G2JGN3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ighv1-78A0A0G2JGN3 Gm10232-201ENSMUST00000089221 720 ntBASIC19.21■□□□□ 0.67
Ighv1-78A0A0G2JGN3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-78A0A0G2JGN3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-78A0A0G2JGN3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-78A0A0G2JGN3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.19■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Gm15820-201ENSMUST00000201566 728 ntBASIC19.18■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.18■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.18■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-78A0A0G2JGN3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ighv1-78A0A0G2JGN3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.14■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.13■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.13■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-78A0A0G2JGN3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.12■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.12■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-78A0A0G2JGN3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.1■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-78A0A0G2JGN3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-78A0A0G2JGN3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ighv1-78A0A0G2JGN3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms