Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Gm9397-201ENSMUST00000200125 605 ntBASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav4-3A0A0B4J1K1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav4-3A0A0B4J1K1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav4-3A0A0B4J1K1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav4-3A0A0B4J1K1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-3A0A0B4J1K1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav4-3A0A0B4J1K1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav4-3A0A0B4J1K1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.52□□□□□ -0.09
Trav4-3A0A0B4J1K1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-3A0A0B4J1K1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-3A0A0B4J1K1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-3A0A0B4J1K1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-3A0A0B4J1K1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-3A0A0B4J1K1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav4-3A0A0B4J1K1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav4-3A0A0B4J1K1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav4-3A0A0B4J1K1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav4-3A0A0B4J1K1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav4-3A0A0B4J1K1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-3A0A0B4J1K1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-3A0A0B4J1K1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav4-3A0A0B4J1K1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Trav4-3A0A0B4J1K1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-3A0A0B4J1K1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav4-3A0A0B4J1K1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav4-3A0A0B4J1K1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-3A0A0B4J1K1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-3A0A0B4J1K1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-3A0A0B4J1K1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-3A0A0B4J1K1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav4-3A0A0B4J1K1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav4-3A0A0B4J1K1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-3A0A0B4J1K1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-3A0A0B4J1K1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-3A0A0B4J1K1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-3A0A0B4J1K1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav4-3A0A0B4J1K1 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.43□□□□□ -0.1
Trav4-3A0A0B4J1K1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav4-3A0A0B4J1K1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms