Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Etf1-202ENSMUST00000180351 108 ntBASIC22.12■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-45A0A0B4J1J1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.12■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-45A0A0B4J1J1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC22.1■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.1■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.09■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22.09■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Igkv5-45A0A0B4J1J1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.08■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Gm40881-201ENSMUST00000223397 166 ntBASIC22.08■■□□□ 1.13
Igkv5-45A0A0B4J1J1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv5-45A0A0B4J1J1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.07■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Gm10399-202ENSMUST00000202768 748 ntBASIC22.07■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Igkv5-45A0A0B4J1J1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.06■■□□□ 1.12
Igkv5-45A0A0B4J1J1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.05■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC22.03■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Igkv5-45A0A0B4J1J1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.01■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Gm7417-201ENSMUST00000192950 473 ntBASIC22.01■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 AC116713.1-201ENSMUST00000215074 430 ntBASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv5-45A0A0B4J1J1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.98■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.97■■□□□ 1.11
Igkv5-45A0A0B4J1J1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms