Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.78■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.78■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.78■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ighv1-43A0A0A6YXN5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.77■□□□□ 0.76
Ighv1-43A0A0A6YXN5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.77■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ighv1-43A0A0A6YXN5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.75■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Gm22238-201ENSMUST00000175222 88 ntBASIC19.72■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-43A0A0A6YXN5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-43A0A0A6YXN5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.69■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ighv1-43A0A0A6YXN5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms