Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav17A0A075B655 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav17A0A075B655 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav17A0A075B655 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trav17A0A075B655 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav17A0A075B655 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav17A0A075B655 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav17A0A075B655 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav17A0A075B655 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trav17A0A075B655 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.89■□□□□ 0.29
Trav17A0A075B655 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav17A0A075B655 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.88■□□□□ 0.29
Trav17A0A075B655 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav17A0A075B655 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav17A0A075B655 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav17A0A075B655 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav17A0A075B655 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav17A0A075B655 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav17A0A075B655 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav17A0A075B655 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav17A0A075B655 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav17A0A075B655 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav17A0A075B655 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav17A0A075B655 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav17A0A075B655 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav17A0A075B655 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav17A0A075B655 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav17A0A075B655 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav17A0A075B655 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trav17A0A075B655 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC16.83■□□□□ 0.28
Trav17A0A075B655 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav17A0A075B655 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.83■□□□□ 0.28
Trav17A0A075B655 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav17A0A075B655 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav17A0A075B655 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav17A0A075B655 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav17A0A075B655 Gm7432-201ENSMUST00000210343 879 ntBASIC16.82■□□□□ 0.28
Trav17A0A075B655 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav17A0A075B655 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav17A0A075B655 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav17A0A075B655 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav17A0A075B655 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav17A0A075B655 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav17A0A075B655 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav17A0A075B655 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trav17A0A075B655 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav17A0A075B655 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav17A0A075B655 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav17A0A075B655 Gm11599-201ENSMUST00000118720 878 ntBASIC16.8■□□□□ 0.28
Trav17A0A075B655 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav17A0A075B655 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav17A0A075B655 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trav17A0A075B655 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav17A0A075B655 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.79■□□□□ 0.28
Trav17A0A075B655 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav17A0A075B655 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.79■□□□□ 0.28
Trav17A0A075B655 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav17A0A075B655 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav17A0A075B655 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav17A0A075B655 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav17A0A075B655 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav17A0A075B655 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms