Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav3-4A0A075B654 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav3-4A0A075B654 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-4A0A075B654 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-4A0A075B654 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav3-4A0A075B654 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.28□□□□□ -0.12
Trav3-4A0A075B654 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav3-4A0A075B654 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav3-4A0A075B654 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3-4A0A075B654 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav3-4A0A075B654 Gm9910-201ENSMUST00000195385 1550 ntBASIC14.27□□□□□ -0.12
Trav3-4A0A075B654 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav3-4A0A075B654 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-4A0A075B654 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-4A0A075B654 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-4A0A075B654 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-4A0A075B654 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-4A0A075B654 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav3-4A0A075B654 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Gm30023-201ENSMUST00000197970 889 ntBASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav3-4A0A075B654 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-4A0A075B654 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-4A0A075B654 Gm16148-201ENSMUST00000119653 893 ntBASIC14.25□□□□□ -0.13
Trav3-4A0A075B654 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav3-4A0A075B654 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-4A0A075B654 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-4A0A075B654 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav3-4A0A075B654 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav3-4A0A075B654 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Trav3-4A0A075B654 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav3-4A0A075B654 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav3-4A0A075B654 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav3-4A0A075B654 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-4A0A075B654 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-4A0A075B654 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav3-4A0A075B654 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav3-4A0A075B654 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-4A0A075B654 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav3-4A0A075B654 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav3-4A0A075B654 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav3-4A0A075B654 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav3-4A0A075B654 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav3-4A0A075B654 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.21□□□□□ -0.14
Trav3-4A0A075B654 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav3-4A0A075B654 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav3-4A0A075B654 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms