Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-2A0A075B649 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav13-2A0A075B649 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 AC153524.1-201ENSMUST00000220436 1935 ntBASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Terc-201ENSMUST00000082862 423 ntBASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav13-2A0A075B649 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav13-2A0A075B649 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav13-2A0A075B649 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav13-2A0A075B649 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Gm22567-201ENSMUST00000175542 342 ntBASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trav13-2A0A075B649 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Gm8503-201ENSMUST00000118131 455 ntBASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav13-2A0A075B649 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav13-2A0A075B649 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Gm45364-201ENSMUST00000210883 159 ntBASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav13-2A0A075B649 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Trav13-2A0A075B649 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 AC154454.1-201ENSMUST00000225253 216 ntBASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Trav13-2A0A075B649 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav13-2A0A075B649 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms