Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.68■□□□□ 0.74
Trav8n-2A0A075B633 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav8n-2A0A075B633 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav8n-2A0A075B633 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav8n-2A0A075B633 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.67■□□□□ 0.74
Trav8n-2A0A075B633 Gm45417-201ENSMUST00000209533 758 ntBASIC19.67■□□□□ 0.74
Trav8n-2A0A075B633 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trav8n-2A0A075B633 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav8n-2A0A075B633 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav8n-2A0A075B633 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trav8n-2A0A075B633 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trav8n-2A0A075B633 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav8n-2A0A075B633 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trav8n-2A0A075B633 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Trav8n-2A0A075B633 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Trav8n-2A0A075B633 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav8n-2A0A075B633 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trav8n-2A0A075B633 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav8n-2A0A075B633 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.6■□□□□ 0.73
Trav8n-2A0A075B633 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav8n-2A0A075B633 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav8n-2A0A075B633 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav8n-2A0A075B633 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav8n-2A0A075B633 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8n-2A0A075B633 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav8n-2A0A075B633 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trav8n-2A0A075B633 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8n-2A0A075B633 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8n-2A0A075B633 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav8n-2A0A075B633 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.58■□□□□ 0.72
Trav8n-2A0A075B633 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.57■□□□□ 0.72
Trav8n-2A0A075B633 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8n-2A0A075B633 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8n-2A0A075B633 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav8n-2A0A075B633 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.56■□□□□ 0.72
Trav8n-2A0A075B633 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.56■□□□□ 0.72
Trav8n-2A0A075B633 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trav8n-2A0A075B633 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.55■□□□□ 0.72
Trav8n-2A0A075B633 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8n-2A0A075B633 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.55■□□□□ 0.72
Trav8n-2A0A075B633 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trav8n-2A0A075B633 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8n-2A0A075B633 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav8n-2A0A075B633 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav8n-2A0A075B633 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms