Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Iqck-206ENSMUST00000208658 2891 ntBASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav7n-4A0A075B620 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7n-4A0A075B620 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7n-4A0A075B620 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7n-4A0A075B620 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav7n-4A0A075B620 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7n-4A0A075B620 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7n-4A0A075B620 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7n-4A0A075B620 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.09■□□□□ 0.17
Trav7n-4A0A075B620 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7n-4A0A075B620 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7n-4A0A075B620 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7n-4A0A075B620 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7n-4A0A075B620 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7n-4A0A075B620 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7n-4A0A075B620 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC16.08■□□□□ 0.17
Trav7n-4A0A075B620 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7n-4A0A075B620 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7n-4A0A075B620 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7n-4A0A075B620 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav7n-4A0A075B620 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7n-4A0A075B620 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7n-4A0A075B620 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7n-4A0A075B620 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav7n-4A0A075B620 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7n-4A0A075B620 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7n-4A0A075B620 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7n-4A0A075B620 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7n-4A0A075B620 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7n-4A0A075B620 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7n-4A0A075B620 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7n-4A0A075B620 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav7n-4A0A075B620 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7n-4A0A075B620 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7n-4A0A075B620 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7n-4A0A075B620 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7n-4A0A075B620 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7n-4A0A075B620 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7n-4A0A075B620 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7n-4A0A075B620 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms