Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav5-1A0A075B5Z7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav5-1A0A075B5Z7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav5-1A0A075B5Z7 Gm10399-202ENSMUST00000202768 748 ntBASIC18.37■□□□□ 0.53
Trav5-1A0A075B5Z7 Gm45102-201ENSMUST00000207427 857 ntBASIC18.37■□□□□ 0.53
Trav5-1A0A075B5Z7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav5-1A0A075B5Z7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav5-1A0A075B5Z7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav5-1A0A075B5Z7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav5-1A0A075B5Z7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav5-1A0A075B5Z7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav5-1A0A075B5Z7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav5-1A0A075B5Z7 Etf1-202ENSMUST00000180351 108 ntBASIC18.34■□□□□ 0.53
Trav5-1A0A075B5Z7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav5-1A0A075B5Z7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav5-1A0A075B5Z7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav5-1A0A075B5Z7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav5-1A0A075B5Z7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav5-1A0A075B5Z7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav5-1A0A075B5Z7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav5-1A0A075B5Z7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.33■□□□□ 0.52
Trav5-1A0A075B5Z7 Gm9959-201ENSMUST00000068277 390 ntBASIC18.33■□□□□ 0.52
Trav5-1A0A075B5Z7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav5-1A0A075B5Z7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trav5-1A0A075B5Z7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav5-1A0A075B5Z7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav5-1A0A075B5Z7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trav5-1A0A075B5Z7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Gm14117-201ENSMUST00000122417 843 ntBASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Gm7417-201ENSMUST00000192950 473 ntBASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav5-1A0A075B5Z7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav5-1A0A075B5Z7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav5-1A0A075B5Z7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.29■□□□□ 0.52
Trav5-1A0A075B5Z7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.29■□□□□ 0.52
Trav5-1A0A075B5Z7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav5-1A0A075B5Z7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav5-1A0A075B5Z7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav5-1A0A075B5Z7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav5-1A0A075B5Z7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav5-1A0A075B5Z7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trav5-1A0A075B5Z7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav5-1A0A075B5Z7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav5-1A0A075B5Z7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trav5-1A0A075B5Z7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav5-1A0A075B5Z7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trav5-1A0A075B5Z7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Trav5-1A0A075B5Z7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Trav5-1A0A075B5Z7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Trav5-1A0A075B5Z7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5-1A0A075B5Z7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav5-1A0A075B5Z7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5-1A0A075B5Z7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav5-1A0A075B5Z7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 633.2 ms