Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
H2afb1S4R1E0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
H2afb1S4R1E0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
H2afb1S4R1E0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
H2afb1S4R1E0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
H2afb1S4R1E0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H2afb1S4R1E0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb1S4R1E0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb1S4R1E0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
H2afb1S4R1E0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
H2afb1S4R1E0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
H2afb1S4R1E0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H2afb1S4R1E0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb1S4R1E0 Scarna2-201ENSMUST00000157560 414 ntBASIC19.28■□□□□ 0.68
H2afb1S4R1E0 Gm9806-201ENSMUST00000051080 552 ntBASIC19.28■□□□□ 0.68
H2afb1S4R1E0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H2afb1S4R1E0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
H2afb1S4R1E0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afb1S4R1E0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H2afb1S4R1E0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
H2afb1S4R1E0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb1S4R1E0 Gm16437-201ENSMUST00000025669 507 ntBASIC19.26■□□□□ 0.67
H2afb1S4R1E0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb1S4R1E0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb1S4R1E0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H2afb1S4R1E0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
H2afb1S4R1E0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H2afb1S4R1E0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb1S4R1E0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.24■□□□□ 0.67
H2afb1S4R1E0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb1S4R1E0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb1S4R1E0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb1S4R1E0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
H2afb1S4R1E0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Gm11687-201ENSMUST00000118911 886 ntBASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
H2afb1S4R1E0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H2afb1S4R1E0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
H2afb1S4R1E0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb1S4R1E0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.21■□□□□ 0.67
H2afb1S4R1E0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H2afb1S4R1E0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.21■□□□□ 0.67
H2afb1S4R1E0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms