Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cdh17Q9R100 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Cdh17Q9R100 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdh17Q9R100 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh17Q9R100 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh17Q9R100 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh17Q9R100 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh17Q9R100 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cdh17Q9R100 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cdh17Q9R100 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh17Q9R100 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh17Q9R100 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh17Q9R100 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh17Q9R100 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh17Q9R100 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.91■□□□□ 0.94
Cdh17Q9R100 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh17Q9R100 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.89■□□□□ 0.94
Cdh17Q9R100 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh17Q9R100 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh17Q9R100 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh17Q9R100 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cdh17Q9R100 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cdh17Q9R100 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cdh17Q9R100 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.88■□□□□ 0.93
Cdh17Q9R100 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh17Q9R100 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh17Q9R100 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh17Q9R100 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cdh17Q9R100 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh17Q9R100 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh17Q9R100 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh17Q9R100 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh17Q9R100 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cdh17Q9R100 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh17Q9R100 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh17Q9R100 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh17Q9R100 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh17Q9R100 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cdh17Q9R100 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh17Q9R100 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh17Q9R100 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh17Q9R100 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.84■□□□□ 0.93
Cdh17Q9R100 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh17Q9R100 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh17Q9R100 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Cdh17Q9R100 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh17Q9R100 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdh17Q9R100 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdh17Q9R100 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.82■□□□□ 0.92
Cdh17Q9R100 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh17Q9R100 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh17Q9R100 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh17Q9R100 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh17Q9R100 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh17Q9R100 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdh17Q9R100 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms