Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.97■■□□□ 1.11
Vps28Q9D1C8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps28Q9D1C8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Vps28Q9D1C8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Vps28Q9D1C8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps28Q9D1C8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps28Q9D1C8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps28Q9D1C8 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps28Q9D1C8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vps28Q9D1C8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Vps28Q9D1C8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.96■■□□□ 1.11
Vps28Q9D1C8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Vps28Q9D1C8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Vps28Q9D1C8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Gm15546-201ENSMUST00000122095 826 ntBASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vps28Q9D1C8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps28Q9D1C8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.94■■□□□ 1.1
Vps28Q9D1C8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Vps28Q9D1C8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.94■■□□□ 1.1
Vps28Q9D1C8 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.94■■□□□ 1.1
Vps28Q9D1C8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vps28Q9D1C8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.93■■□□□ 1.1
Vps28Q9D1C8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Vps28Q9D1C8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vps28Q9D1C8 Gm22567-201ENSMUST00000175542 342 ntBASIC21.93■■□□□ 1.1
Vps28Q9D1C8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.93■■□□□ 1.1
Vps28Q9D1C8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.93■■□□□ 1.1
Vps28Q9D1C8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Vps28Q9D1C8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.93■■□□□ 1.1
Vps28Q9D1C8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps28Q9D1C8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps28Q9D1C8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps28Q9D1C8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Vps28Q9D1C8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vps28Q9D1C8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vps28Q9D1C8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Gm15820-201ENSMUST00000201566 728 ntBASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vps28Q9D1C8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Vps28Q9D1C8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps28Q9D1C8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps28Q9D1C8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps28Q9D1C8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps28Q9D1C8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vps28Q9D1C8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps28Q9D1C8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Vps28Q9D1C8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vps28Q9D1C8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Vps28Q9D1C8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Vps28Q9D1C8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps28Q9D1C8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps28Q9D1C8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps28Q9D1C8 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.85■■□□□ 1.09
Vps28Q9D1C8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps28Q9D1C8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps28Q9D1C8 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps28Q9D1C8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Vps28Q9D1C8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps28Q9D1C8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps28Q9D1C8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps28Q9D1C8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps28Q9D1C8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps28Q9D1C8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps28Q9D1C8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms