Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt88Q9CPR6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.31■□□□□ 0.68
Krt88Q9CPR6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Krt88Q9CPR6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt88Q9CPR6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Krt88Q9CPR6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Krt88Q9CPR6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.3■□□□□ 0.68
Krt88Q9CPR6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Krt88Q9CPR6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Krt88Q9CPR6 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt88Q9CPR6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Krt88Q9CPR6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Krt88Q9CPR6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.27■□□□□ 0.68
Krt88Q9CPR6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.27■□□□□ 0.68
Krt88Q9CPR6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Krt88Q9CPR6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Krt88Q9CPR6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Krt88Q9CPR6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Krt88Q9CPR6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt88Q9CPR6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Krt88Q9CPR6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Krt88Q9CPR6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Gm6821-201ENSMUST00000107540 542 ntBASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Terc-201ENSMUST00000082862 423 ntBASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Krt88Q9CPR6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.24■□□□□ 0.67
Krt88Q9CPR6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.23■□□□□ 0.67
Krt88Q9CPR6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt88Q9CPR6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Krt88Q9CPR6 Mir3960-201ENSMUST00000198213 73 ntBASIC19.22■□□□□ 0.67
Krt88Q9CPR6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Krt88Q9CPR6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt88Q9CPR6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt88Q9CPR6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt88Q9CPR6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt88Q9CPR6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt88Q9CPR6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt88Q9CPR6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.21■□□□□ 0.67
Krt88Q9CPR6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt88Q9CPR6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt88Q9CPR6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt88Q9CPR6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt88Q9CPR6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.19■□□□□ 0.66
Krt88Q9CPR6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt88Q9CPR6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.18■□□□□ 0.66
Krt88Q9CPR6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt88Q9CPR6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt88Q9CPR6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.18■□□□□ 0.66
Krt88Q9CPR6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt88Q9CPR6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.18■□□□□ 0.66
Krt88Q9CPR6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt88Q9CPR6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms