Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.58■■□□□ 1.69
Col20a1Q923P0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Col20a1Q923P0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col20a1Q923P0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col20a1Q923P0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC25.57■■□□□ 1.68
Col20a1Q923P0 Gm7417-201ENSMUST00000192950 473 ntBASIC25.57■■□□□ 1.68
Col20a1Q923P0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Col20a1Q923P0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
Col20a1Q923P0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col20a1Q923P0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Col20a1Q923P0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.56■■□□□ 1.68
Col20a1Q923P0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Gm40881-201ENSMUST00000223397 166 ntBASIC25.55■■□□□ 1.68
Col20a1Q923P0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Col20a1Q923P0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col20a1Q923P0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col20a1Q923P0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col20a1Q923P0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.54■■□□□ 1.68
Col20a1Q923P0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.54■■□□□ 1.68
Col20a1Q923P0 Gm10399-202ENSMUST00000202768 748 ntBASIC25.54■■□□□ 1.68
Col20a1Q923P0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Col20a1Q923P0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC25.53■■□□□ 1.68
Col20a1Q923P0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Col20a1Q923P0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col20a1Q923P0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col20a1Q923P0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
Col20a1Q923P0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Col20a1Q923P0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Col20a1Q923P0 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.51■■□□□ 1.67
Col20a1Q923P0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col20a1Q923P0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Col20a1Q923P0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col20a1Q923P0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Col20a1Q923P0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col20a1Q923P0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Col20a1Q923P0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col20a1Q923P0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Col20a1Q923P0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col20a1Q923P0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col20a1Q923P0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col20a1Q923P0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Col20a1Q923P0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col20a1Q923P0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Col20a1Q923P0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col20a1Q923P0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC25.48■■□□□ 1.67
Col20a1Q923P0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.48■■□□□ 1.67
Col20a1Q923P0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.48■■□□□ 1.67
Col20a1Q923P0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col20a1Q923P0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Col20a1Q923P0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Col20a1Q923P0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col20a1Q923P0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col20a1Q923P0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC25.46■■□□□ 1.67
Col20a1Q923P0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.46■■□□□ 1.67
Col20a1Q923P0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col20a1Q923P0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col20a1Q923P0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Col20a1Q923P0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col20a1Q923P0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col20a1Q923P0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Col20a1Q923P0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.44■■□□□ 1.66
Col20a1Q923P0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col20a1Q923P0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col20a1Q923P0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col20a1Q923P0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Col20a1Q923P0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.43■■□□□ 1.66
Col20a1Q923P0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col20a1Q923P0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.43■■□□□ 1.66
Col20a1Q923P0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col20a1Q923P0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Col20a1Q923P0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col20a1Q923P0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.42■■□□□ 1.66
Col20a1Q923P0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col20a1Q923P0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col20a1Q923P0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col20a1Q923P0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Col20a1Q923P0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.42■■□□□ 1.66
Col20a1Q923P0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col20a1Q923P0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col20a1Q923P0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
Col20a1Q923P0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Col20a1Q923P0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
Col20a1Q923P0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col20a1Q923P0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col20a1Q923P0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Col20a1Q923P0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC25.4■■□□□ 1.66
Col20a1Q923P0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col20a1Q923P0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col20a1Q923P0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col20a1Q923P0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms