Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgc3Q91XX1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgc3Q91XX1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgc3Q91XX1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pcdhgc3Q91XX1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgc3Q91XX1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgc3Q91XX1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pcdhgc3Q91XX1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc3Q91XX1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc3Q91XX1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pcdhgc3Q91XX1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc3Q91XX1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pcdhgc3Q91XX1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Pcdhgc3Q91XX1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pcdhgc3Q91XX1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc3Q91XX1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc3Q91XX1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc3Q91XX1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc3Q91XX1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgc3Q91XX1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.16■□□□□ 0.82
Pcdhgc3Q91XX1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhgc3Q91XX1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.14■□□□□ 0.82
Pcdhgc3Q91XX1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhgc3Q91XX1 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.14■□□□□ 0.81
Pcdhgc3Q91XX1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc3Q91XX1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgc3Q91XX1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgc3Q91XX1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgc3Q91XX1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc3Q91XX1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc3Q91XX1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc3Q91XX1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc3Q91XX1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc3Q91XX1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgc3Q91XX1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhgc3Q91XX1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgc3Q91XX1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgc3Q91XX1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhgc3Q91XX1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgc3Q91XX1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgc3Q91XX1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgc3Q91XX1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc3Q91XX1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Pcdhgc3Q91XX1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pcdhgc3Q91XX1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhgc3Q91XX1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgc3Q91XX1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgc3Q91XX1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhgc3Q91XX1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
Pcdhgc3Q91XX1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.08■□□□□ 0.81
Pcdhgc3Q91XX1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgc3Q91XX1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Pcdhgc3Q91XX1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhgc3Q91XX1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgc3Q91XX1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgc3Q91XX1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhgc3Q91XX1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms