Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trim60Q8VI40 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim60Q8VI40 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim60Q8VI40 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim60Q8VI40 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.17■■□□□ 1.14
Trim60Q8VI40 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Trim60Q8VI40 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trim60Q8VI40 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim60Q8VI40 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
Trim60Q8VI40 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Trim60Q8VI40 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim60Q8VI40 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim60Q8VI40 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Trim60Q8VI40 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.16■■□□□ 1.14
Trim60Q8VI40 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim60Q8VI40 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim60Q8VI40 Gm9806-201ENSMUST00000051080 552 ntBASIC22.16■■□□□ 1.14
Trim60Q8VI40 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim60Q8VI40 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim60Q8VI40 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim60Q8VI40 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim60Q8VI40 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim60Q8VI40 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim60Q8VI40 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Trim60Q8VI40 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim60Q8VI40 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim60Q8VI40 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.14■■□□□ 1.14
Trim60Q8VI40 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim60Q8VI40 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.14■■□□□ 1.13
Trim60Q8VI40 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.14■■□□□ 1.13
Trim60Q8VI40 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Trim60Q8VI40 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim60Q8VI40 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim60Q8VI40 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.14■■□□□ 1.13
Trim60Q8VI40 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Scarna2-201ENSMUST00000157560 414 ntBASIC22.13■■□□□ 1.13
Trim60Q8VI40 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
Trim60Q8VI40 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trim60Q8VI40 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Trim60Q8VI40 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.11■■□□□ 1.13
Trim60Q8VI40 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.11■■□□□ 1.13
Trim60Q8VI40 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim60Q8VI40 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim60Q8VI40 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim60Q8VI40 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim60Q8VI40 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim60Q8VI40 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim60Q8VI40 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.1■■□□□ 1.13
Trim60Q8VI40 Gm16437-201ENSMUST00000025669 507 ntBASIC22.1■■□□□ 1.13
Trim60Q8VI40 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
Trim60Q8VI40 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim60Q8VI40 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trim60Q8VI40 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.09■■□□□ 1.13
Trim60Q8VI40 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.09■■□□□ 1.13
Trim60Q8VI40 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim60Q8VI40 Gm11687-201ENSMUST00000118911 886 ntBASIC22.08■■□□□ 1.13
Trim60Q8VI40 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.08■■□□□ 1.13
Trim60Q8VI40 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim60Q8VI40 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim60Q8VI40 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.08■■□□□ 1.12
Trim60Q8VI40 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim60Q8VI40 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Trim60Q8VI40 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim60Q8VI40 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Trim60Q8VI40 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim60Q8VI40 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim60Q8VI40 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim60Q8VI40 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim60Q8VI40 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim60Q8VI40 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Trim60Q8VI40 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim60Q8VI40 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim60Q8VI40 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.05■■□□□ 1.12
Trim60Q8VI40 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim60Q8VI40 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim60Q8VI40 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trim60Q8VI40 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms