Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdt1Q8R4E9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdt1Q8R4E9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdt1Q8R4E9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdt1Q8R4E9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Cdt1Q8R4E9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdt1Q8R4E9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdt1Q8R4E9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdt1Q8R4E9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdt1Q8R4E9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdt1Q8R4E9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdt1Q8R4E9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdt1Q8R4E9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdt1Q8R4E9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdt1Q8R4E9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdt1Q8R4E9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.67■□□□□ 0.9
Cdt1Q8R4E9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdt1Q8R4E9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdt1Q8R4E9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdt1Q8R4E9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdt1Q8R4E9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdt1Q8R4E9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdt1Q8R4E9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.65■□□□□ 0.9
Cdt1Q8R4E9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cdt1Q8R4E9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Cdt1Q8R4E9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdt1Q8R4E9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdt1Q8R4E9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.63■□□□□ 0.89
Cdt1Q8R4E9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdt1Q8R4E9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdt1Q8R4E9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdt1Q8R4E9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdt1Q8R4E9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdt1Q8R4E9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdt1Q8R4E9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdt1Q8R4E9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdt1Q8R4E9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cdt1Q8R4E9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdt1Q8R4E9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.6■□□□□ 0.89
Cdt1Q8R4E9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdt1Q8R4E9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.6■□□□□ 0.89
Cdt1Q8R4E9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdt1Q8R4E9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdt1Q8R4E9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Cdt1Q8R4E9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdt1Q8R4E9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdt1Q8R4E9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.59■□□□□ 0.89
Cdt1Q8R4E9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdt1Q8R4E9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdt1Q8R4E9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdt1Q8R4E9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdt1Q8R4E9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cdt1Q8R4E9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdt1Q8R4E9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdt1Q8R4E9 Etf1-202ENSMUST00000180351 108 ntBASIC20.58■□□□□ 0.89
Cdt1Q8R4E9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdt1Q8R4E9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdt1Q8R4E9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdt1Q8R4E9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdt1Q8R4E9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdt1Q8R4E9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdt1Q8R4E9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.57■□□□□ 0.88
Cdt1Q8R4E9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.57■□□□□ 0.88
Cdt1Q8R4E9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdt1Q8R4E9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdt1Q8R4E9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdt1Q8R4E9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Cdt1Q8R4E9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdt1Q8R4E9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdt1Q8R4E9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdt1Q8R4E9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdt1Q8R4E9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdt1Q8R4E9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms