Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC31.11■■■□□ 2.57
Cd109Q8R422 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cd109Q8R422 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cd109Q8R422 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Cd109Q8R422 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC31.09■■■□□ 2.57
Cd109Q8R422 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Cd109Q8R422 Gm21956-201ENSMUST00000179946 522 ntBASIC31.09■■■□□ 2.57
Cd109Q8R422 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cd109Q8R422 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC31.07■■■□□ 2.57
Cd109Q8R422 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC31.07■■■□□ 2.57
Cd109Q8R422 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.57
Cd109Q8R422 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Cd109Q8R422 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Cd109Q8R422 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Cd109Q8R422 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Cd109Q8R422 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Cd109Q8R422 Gm13241-201ENSMUST00000094493 780 ntBASIC31.06■■■□□ 2.56
Cd109Q8R422 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cd109Q8R422 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Cd109Q8R422 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Cd109Q8R422 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cd109Q8R422 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
Cd109Q8R422 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cd109Q8R422 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
Cd109Q8R422 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cd109Q8R422 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Cd109Q8R422 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Cd109Q8R422 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
Cd109Q8R422 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Cd109Q8R422 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Cd109Q8R422 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cd109Q8R422 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Cd109Q8R422 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC31■■■□□ 2.55
Cd109Q8R422 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC30.99■■■□□ 2.55
Cd109Q8R422 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Cd109Q8R422 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cd109Q8R422 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Cd109Q8R422 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Cd109Q8R422 Gm9847-201ENSMUST00000052528 599 ntBASIC30.98■■■□□ 2.55
Cd109Q8R422 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cd109Q8R422 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cd109Q8R422 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cd109Q8R422 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cd109Q8R422 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Cd109Q8R422 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Cd109Q8R422 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Cd109Q8R422 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Cd109Q8R422 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC30.95■■■□□ 2.54
Cd109Q8R422 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Cd109Q8R422 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.54
Cd109Q8R422 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Cd109Q8R422 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC30.94■■■□□ 2.54
Cd109Q8R422 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cd109Q8R422 Gm12922-201ENSMUST00000120626 809 ntBASIC30.93■■■□□ 2.54
Cd109Q8R422 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC30.93■■■□□ 2.54
Cd109Q8R422 Gm43034-201ENSMUST00000198678 1364 ntBASIC30.93■■■□□ 2.54
Cd109Q8R422 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cd109Q8R422 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Cd109Q8R422 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cd109Q8R422 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC30.92■■■□□ 2.54
Cd109Q8R422 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
Cd109Q8R422 Gm10620-201ENSMUST00000098379 1332 ntBASIC30.92■■■□□ 2.54
Cd109Q8R422 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cd109Q8R422 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cd109Q8R422 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cd109Q8R422 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cd109Q8R422 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
Cd109Q8R422 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cd109Q8R422 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Cd109Q8R422 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Cd109Q8R422 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Cd109Q8R422 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cd109Q8R422 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cd109Q8R422 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Cd109Q8R422 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Cd109Q8R422 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Cd109Q8R422 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC30.89■■■□□ 2.53
Cd109Q8R422 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cd109Q8R422 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cd109Q8R422 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC30.88■■■□□ 2.53
Cd109Q8R422 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cd109Q8R422 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Cd109Q8R422 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cd109Q8R422 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cd109Q8R422 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cd109Q8R422 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC30.87■■■□□ 2.53
Cd109Q8R422 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC30.87■■■□□ 2.53
Cd109Q8R422 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cd109Q8R422 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cd109Q8R422 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Cd109Q8R422 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Cd109Q8R422 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Cd109Q8R422 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Cd109Q8R422 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cd109Q8R422 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cd109Q8R422 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC30.84■■■□□ 2.53
Cd109Q8R422 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Cd109Q8R422 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Cd109Q8R422 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Cd109Q8R422 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms